BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030H09SP1|AL429302
(964 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1745 1872 0.0
>3x_Contig1745
Length = 19830
Score = 1872 bits (940), Expect = 0.0
Identities = 956/965 (99%), Gaps = 1/965 (0%)
Strand = Plus / Plus
Query: 1 gatccatcttttacaatttttaacgtcgggtacaggtggtccctctcttttgcatcgatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11460 gatccatcttttacaatttttaacgtcgggtacaggtggtccctctcttttgcatcgatt 11519
Query: 61 kttcckagtccctgcagtgttccaaccgggattctcgtattctgatactacttcaggatc 120
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11520 gttccgagtccctgcagtgttccaaccgggattctcgtattctgatactacttcaggatc 11579
Query: 121 atcagcatctgaggttcagatgctctggaatgcttccattgagatgatagctggtctatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11580 atcagcatctgaggttcagatgctctggaatgcttccattgagatgatagctggtctatc 11639
Query: 181 gttatttaaaaacggattcgtttctgtgacaagtactaacgcagctgcggtggcagctsa 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 11640 gttatttaaaaacggattcgtttctgtgacaagtactaacgcagctgcggtggcagctga 11699
Query: 241 na-aggctattgccggtggtagttcttcagttggggcccctggtgagaagttttcgcaaa 299
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11700 aagaggctattgccggtggtagttcttcagttggggcccctggtgagaagttttcgcaaa 11759
Query: 300 araatactttatgccctgtttgtggtgaggtcgctacaaatgcatttacaatcacttgct 359
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11760 agaatactttatgccctgtttgtggtgaggtcgctacaaatgcatttacaatcacttgct 11819
Query: 360 gcaatacaaggtattgctacacttgtgcgttggaagtggaacagtcacattgcctagttt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11820 gcaatacaaggtattgctacacttgtgcgttggaagtggaacagtcacattgcctagttt 11879
Query: 420 gtaatactaagaacccaaaattcttttgctaaagtgtttattataccctatatattcaca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11880 gtaatactaagaacccaaaattcttttgctaaagtgtttattataccctatatattcaca 11939
Query: 480 cctaggccaaatctatatacgttattacttcccaggcaatgctaaaacagtattattaaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11940 cctaggccaaatctatatacgttattacttcccaggcaatgctaaaacagtattattaaa 11999
Query: 540 ctctcttacagttatttcgcaccgcacttgtttacacaactccttcttcttctcctttgg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12000 ctctcttacagttatttcgcaccgcacttgtttacacaactccttcttcttctcctttgg 12059
Query: 600 aacattctgcaacagctgcaggccggaactcctttctaatgcattgacgggtacttcaaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12060 aacattctgcaacagctgcaggccggaactcctttctaatgcattgacgggtacttcaaa 12119
Query: 660 ctctattaatgttgtagagttcgaaataggagcatttggtaagacaaatgcggcaacgtg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12120 ctctattaatgttgtagagttcgaaataggagcatttggtaagacaaatgcggcaacgtg 12179
Query: 720 cagctcatcatcacgaccatttccaagctgcttaggtctttcagccacgaccaacttgaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12180 cagctcatcatcacgaccatttccaagctgcttaggtctttcagccacgaccaacttgaa 12239
Query: 780 aaaatgcgttgggactgcwatgttaggtggatttccaatcatctcgtatgtractttgaa 839
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 12240 aaaatgcgttgggactgcaatgttaggtggatttccaatcatctcgtatgtgactttgaa 12299
Query: 840 cttaccgtctttggggtctcgcttcggcaagtataagggacctgtcataattcgaacact 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12300 cttaccgtctttggggtctcgcttcggcaagtataagggacctgtcataattcgaacact 12359
Query: 900 gttgtatttatcgactaattgtctgcagaaatactccaaatgtgcccmgtaatctctatt 959
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 12360 gttgtatttatcgactaattgtctgcagaaatactccaaatgtgcccagtaatctctatt 12419
Query: 960 gaaac 964
|||||
Sbjct: 12420 gaaac 12424
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5972
Number of Sequences: 1807
Number of extensions: 5972
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 964
length of database: 10,358,551
effective HSP length: 16
effective length of query: 948
effective length of database: 10,329,639
effective search space: 9792497772
effective search space used: 9792497772
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)